No-one can survive a fall at terminal velocity into water.
When a tower links a cable reel to Link, the cable is not attached to the tower.
In some places with lava, the temperature isn't as high as other places with lava.
Some clothing can be found in places which haven't seen use in hundreds of years, and still the clothing is in one piece.
Some pieces of clothing insulate completely against heat, cold, or electricity even if they only cover the legs or head and leave the rest of the body uncovered.
Leggings and hats can be worn for cold protection, even though they shouldn't really be effective if the rest of the body is scantily covered.
One of the constructs says that it has chopped wood daily. If it had done that, it would quickly have chopped down all the trees, yet few stumps can be seen.
A guard in Gerudo Town says that Link may stay in one of the houses, heedless of the fact that there may be belongings within those houses.
While Link is able to use ancient machines and his paraglider, there is no explanation as to how Prince Sidon managed to climb up into the sky islands.
The chief of Gerudo's throne room is not well-protected against intrusion.
Princess Zelda, despite being the Princess, takes it upon herself to venture into the caves beneath Hyrule Castle which for all anyone knows is a dangerous place.
When Link disables a trap, chief Riju sometimes says that her and Link can get by it - even though they already got by it while disabling it.
The Gerudo chief Riju never had a British accent in the previous game, yet she has one in this game.